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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6938646 chr6:151741126 A/G NEK5 chr13:52607747-52703214:- 0.59 6.76 3.93E-11 Box Plot
THCA rs6939799 chr6:26328366 G/A HCG4 chr6:29759530-29760527:- -0.5 -6.01 3.76E-9 Box Plot
THCA rs6939799 chr6:26328366 G/A ZFP57 chr6:29640169-29648887:- 0.53 6.28 7.41E-10 Box Plot
THCA rs6939978 chr6:26328462 G/C HCG4 chr6:29759530-29760527:- -0.49 -5.94 5.43E-9 Box Plot
THCA rs6939978 chr6:26328462 G/C ZFP57 chr6:29640169-29648887:- 0.52 6.18 1.39E-9 Box Plot
THCA rs6940053 chr6:26562122 C/T ZNF322B chr9:99957633-99961910:- 0.58 11.36 1.17E-26 Box Plot
THCA rs6940116 chr6:27708732 A/G BTN3A2 chr6:26365387-26378548:+ -0.33 -6.22 1.12E-9 Box Plot
THCA rs6940188 chr6:26562029 G/C ZNF322B chr9:99957633-99961910:- 0.58 11.36 1.27E-26 Box Plot
THCA rs6940384 chr6:27209911 T/C ZNF322B chr9:99957633-99961910:- -0.39 -6.29 7.2E-10 Box Plot
THCA rs6941022 chr6:26553531 T/C ZNF322B chr9:99957633-99961910:- 0.57 11.17 6.6E-26 Box Plot
THCA rs6942974 chr7:33056415 G/C FKBP9L chr7:55748767-55780945:- 0.41 7.62 1.36E-13 Box Plot
THCA rs6947164 chr7:140145968 A/C LOC441455 chr9:99488103-99489749:+ 0.51 6.54 1.56E-10 Box Plot
THCA rs6947449 chr7:140134785 T/C LOC441455 chr9:99488103-99489749:+ 0.51 6.82 2.71E-11 Box Plot
THCA rs6947507 chr7:33100865 T/A FKBP9L chr7:55748767-55780945:- 0.39 8.93 9.43E-18 Box Plot
THCA rs6948212 chr7:33080238 G/T FKBP9L chr7:55748767-55780945:- 0.4 8.99 5.96E-18 Box Plot